BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A08LP1|AL428829
(469 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 884 0.0
>3x_Contig1619
Length = 7770
Score = 884 bits (441), Expect = 0.0
Identities = 460/471 (97%), Gaps = 2/471 (0%)
Strand = Plus / Minus
Query: 1 aatctgagttcaattctcagtattcaccctttgccccaaatgcgacatcctcatagggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5685 aatctgagttcaattctcagtattcaccctttgccccaaatgcgacatcctcatagggat 5626
Query: 61 gatgcatttggggcttatataaattaatatctacccgcggcaccccccgaag--aggtga 118
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5625 gatgcatttggggcttatataaattaatatctacccgcggcaccccccgaagggaggtga 5566
Query: 119 ccgcgggaaattacttaataaatattaggkaattttatactattatataaatatataata 178
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5565 ccgcgggaaattacttaataaatattaggtaattttatactattatataaatatataata 5506
Query: 179 rcttgtatagtttaattggttaaaacattcgtctcataagcgaagtatataggttcaagt 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5505 acttgtatagtttaattggttaaaacattcgtctcataagcgaagtatataggttcaagt 5446
Query: 239 cccattataagtattaaaaatataatattataatargartataatatatttctkgcaatt 298
||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 5445 cccattataagtattaaaaatataatattataataagaatataatatatttcttgcaatt 5386
Query: 299 ctttataaaaattacgttacgaaagtggataataatatataagaktatccgcaaataata 358
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5385 ctttataaaaattacgttacgaaagtggataataatatataagattatccgcaaataata 5326
Query: 359 caatgtattatttgcngtaatttattaaataataaccccgcggrctcatcatcctactaa 418
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5325 caatgtattatttgcggtaatttattaaataataaccccgcggactcatcatcctactaa 5266
Query: 419 agtagaatgagagccgcgggarattataaatagtttcccccccccccgcgg 469
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5265 agtagaatgagagccgcgggaaattataaatagtttcccccccccccgcgg 5215
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4177
Number of Sequences: 1807
Number of extensions: 4177
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 469
length of database: 10,358,551
effective HSP length: 15
effective length of query: 454
effective length of database: 10,331,446
effective search space: 4690476484
effective search space used: 4690476484
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 49 (98.7 bits)